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python-by-example/src/modules/essential_math/probability.py
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Python

## This module represents the second chapter of the book
## "Essential Math for Data Science" - Thomas Nield
## Chapter 2 - Probability
from scipy.stats import binom, beta
from math import factorial
# 2.0 odds means than an events has twice the probabilities to happen than not
def p_odds_to_probability(o):
return (o / (1 + o))
def p_probability_to_odds(p):
return (p / (1 - p))
class BinomialDistribution:
@staticmethod
def example():
n = 10
p = 0.9
for k in range(n + 1):
probability = binom.pmf(k, n, p)
print("{0} >> {1}".format(k, probability))
@staticmethod
def binomial_coeficient(pool, count):
return factorial(pool) / (factorial(count) * factorial(pool - count))
@staticmethod
def from_scratch(p, n):
# For each number calc the probability of that exact number of outcomes (no order)
for k in range(n + 1):
# 1. Simple combinatory with the binomial coeficient (combinations of k elements out of a pool of n without repetition without order)
combinatory = BinomialDistribution.binomial_coeficient(n, k)
# 2. Probability of success, the probability of making it k times
probability_of_success = p ** k
# 3. Probability of failure, inverse of the success
probability_of_failure = (1 - p) ** (n - k)
k_binomital_distribution_probability = combinatory * probability_of_success * probability_of_failure
print("[{0}]: {1}".format(k, k_binomital_distribution_probability))
# Study probability of probabilities
# > Given X success rate, get the likelihood of that success rate
# > Returns a continuous function, so the final probability of X or better must be calculated using integrals (the area under the curve)
class BetaDistribution:
@staticmethod
def calc(probability, success_count, failure_count):
# Only calcs the rpbability to the left
return beta.cdf(probability, success_count, failure_count)
@staticmethod
def calc_right(probability, success_count, failure_count):
return 1.0 - BetaDistribution.calc(probability, success_count, failure_count)
@staticmethod
def calc_region(init_probability, end_probability, success_count, failure_count):
return BetaDistribution.calc(end_probability, success_count, failure_count) - BetaDistribution.calc(init_probability, success_count, failure_count)
p_r = 0.3
p_u = 0.4
class Exercises:
@staticmethod
def one():
# 30% change of rain and 40% change your umbrella order will arrive. P(R AND U)
return p_r * p_u
@staticmethod
def two():
# Same Ps as previous. P(!R OR U)
# RU !RU !R!U R!U
return (1 - p_r) + p_u - ((1 - p_r) * p_u)
@staticmethod
def three():
p_u_given_rain = 0.2
return p_u_given_rain * p_r
@staticmethod
def four():
n = 137
p_bail = 0.4
p_at_least_50_bail = 0.0
for x in range(50, n + 1):
p_at_least_50_bail += binom.pmf(x, n, p_bail)
return p_at_least_50_bail
@staticmethod
def five():
n = 10
h = 8
t = 2
return 1.0 - BetaDistribution.calc(0.5, 8, 2)
@staticmethod
def test():
print("P(R AND U) = {0}".format(Exercises.one()))
print("P(!R OR U) = {0}".format(Exercises.two()))
print("P(U AND R) = {0}".format(Exercises.three()))
print("P(At least 50 bail) = {0}".format(Exercises.four()))
print("P(fair) = {0}".format(Exercises.five()))
def run():
print("=== Probability module ===")
print(">> Binomial distribution")
BinomialDistribution.example()
BinomialDistribution.from_scratch(0.9, 10)
print(">> Beta distribution")
print(BetaDistribution.calc(0.9,8,2))
print(BetaDistribution.calc_region(0.8, 0.9, 8, 2))
print(">> Exercises")
Exercises.test()